miRbase物种分类.pdf

miRbase 物种分类(2011-09-19 16:56:32)转载 标签：杂谈 分类：miRBase Chromalveolata 囊泡藻界 Heterokontophyta 不等鞭毛纲 Ectocarpus siliculosus(26)长囊水云 Metazoa 动物界，后生动物界 Bilateria 两侧对称动物 Deuterostoma 后口动物 Xenoturbella bocki(8)异涡虫 Chordata 脊索动物门 Cephalochordata 头索动物亚门，全索亚门 Branchiostoma floridae(155)佛州文昌鱼 Urochordata 尾索动物亚门 Ciona intestinalis(331)玻璃海鞘 Ciona savignyi(27)Oikopleura dioica(66)异体住囊虫 Vertebrata 脊椎动物亚门 Agnathostomata 无腭类脊椎动物 Petromyzon marinus(244)海七鳃鳗 Amphibia 两栖纲 Xenopus laevis(22)爪蟾 Xenopus tropicalis(186)非洲蟾蜍 Aves 鸟纲 Gallus gallus(499)原鸡 Taeniopygia guttata(220)珍珠鸟，斑胸草雀 Mammalia 哺乳纲 Carnivora 食肉目 Canis familiaris(323)家犬 Laurasiatheria 劳亚兽总目 Equus caballus(341)马，现代马 Metatheria 后兽亚纲 Monodelphis domestica(157)短尾猊，南方短尾负鼠 Primates 灵长目 Atelidae 蛛猴科 Ateles geoffroyi(60)黑眉蛛猴 Lagothrix lagotricha(48)绒毛猴 Cebidae 卷尾猴科 Saguinus labiatus(42)白唇柽柳猴 Cercopithecidae 猕猴科 Macaca mulatta(479)猕猴,罗猴 Macaca nemestrina(74)南方豚尾猕猴 Pygathrix bieti(11)滇金丝猴，黑仰鼻猴 Hominidae 人科 Gorilla gorilla(85)大猩猩 Homo sapiens(1424)智人 Pan paniscus(88)倭黑猩猩 Pongo pygmaeus(581)猩猩 Pan troglodytes(600)黑猩猩 Symphalangus syndactylus(11)合趾猿 Lemuridae 狐猴科 Lemur catta(16)节尾狐猴，环尾狐猴，狐猴 Prototheria 原兽亚纲，原哺乳亚纲 Ornithorhynchus anatinus(337)鸭嘴兽 Rodentia 啮齿目 Cricetulus griseus(2)灰仓鼠 Mus musculus(720)小鼠 Rattus norvegicus(408)大鼠 Ruminantia 反刍亚目 Bos taurus(662)牛 Ovis aries(55)绵羊 Suina 猪形亚目 Sus scrofa(228)猪 Pisces 鱼纲 Danio rerio(358)斑马鱼 Fugu rubripes(131)河豚，红鳍东方鲀 Oryzias latipes(16)青鳉，宽鳍青鳍鱼 Tetraodon nigroviridis(132)金娃娃，木瓜鱼，潜水艇 Echinodermata 棘皮动物门 Strongylocentrotus purpuratus(57)紫色球海胆 Hemichordata 半索动物门 Saccoglossus kowalevskii(90)囊舌虫 Ecdysozoa 蜕皮动物门 Arthropoda 节肢动物门 Chelicerata 螯肢动物亚门 Ixodes scapularis(37)肩突硬蜱 Crustacea 甲壳纲 Daphnia pulex(45)蚤状溞 Hexapoda 六足亚门 Aedes aegypti(101)埃及伊蚊 Anopheles gambiae(67)冈比亚按蚊 Apis mellifera(174)意蜂 Acyrthosiphon pisum(123)豌豆蚜，豆无网长管蚜 Bombyx mori(487)家蚕 Culex quinquefasciatus(72)致乏库蚊,致倦库蚊 Drosophila ananassae(76)嗜凤梨果蝇，果蝇 Drosophila erecta(81)Drosophila grimshawi(82)翅膀带黑白斑的果蝇 Drosophila melanogaster(238)黑腹果蝇 Drosophila mojavensis(71)Drosophila persimilis(75)Drosophila pseudoobscura(211)拟暗果蝇 Drosophila sechellia(78)Drosophila simulans(136)拟果蝇 Drosophila virilis(74)Drosophila willistoni(77)Drosophila yakuba(80)Heliconius melpomene(2)诗神袖蝶，红带袖蝶 Locusta migratoria(7)飞蝗 Nasonia giraulti(32)胡蜂 Nasonia longicornis(28)金小蜂 Nasonia vitripennis(53)丽蝇蛹集金小蜂 Tribolium castaneum(206)赤拟谷盗 Mandibulata 有颚亚门 Strigamia maritima(4)蜈蚣 Nematoda 线虫纲 Brugia malayi(32)马来布鲁线虫 Caenorhabditis briggsae(140)线虫 Caenorhabditis elegans(207)秀丽隐杆线虫 Caenorhabditis remanei(109)Pristionchus pacificus(124)Lophotrochozoa 冠轮动物总门 Annelida 环节动物门 Capitella teleta(125)Molusca Mollusca 软体动物门 Haliotis rufescens(5)红鲍螺 Lottia gigantea(60)霸王莲花青螺 Nemertea 纽形动物门 Cerebratulus lacteus(2)海洋蠕虫 Platyhelminthes 扁形动物门 Echinococcus granulosus(23)细粒棘球绦虫 Echinococcus multilocularis(22)多房棘球绦虫 Schistosoma japonicum(55)日本血吸虫 Schistosoma mansoni(5)曼氏血吸虫 Schmidtea mediterranea(148)真涡虫 Cnidaria 腔肠动物门 Hydra magnipapillata(17)Nematostella vectensis(49)Porifera 多孔动物门，海绵动物门 Amphimedon queenslandica(8)Mycetozoa 粘菌纲 Dictyostelium discoideum(2)Viridiplantae 绿色植物亚界 Chlorophyta 绿藻门 Chlamydomonas reinhardtii(50)莱茵衣藻，莱哈衣藻，绿藻 Coniferophyta 松柏门 Picea abies(40)挪威云杉 Pinus taeda(37)火炬松，湿地松 Embryophyta 有胚植物亚界 Physcomitrella patens(229)小立碗藓 Selaginella moellendorffii(58)江南卷柏 Magnoliophyta 被子植物门 eudicotyledons 核心真双子叶植物 Brassicaceae 十字花科 Arabidopsis lyrata(201)琴叶拟南芥 Arabidopsis thaliana(232)拟南芥 Brasa napus(46)Brassica oleracea(6)甘蓝 Brassica rapa(19)芜菁 Caricaceae 番木瓜科 Carica papaya(1)Euphorbiaceae 大戟科 Ricinus communis(63)蓖麻 Fabaceae 豆科 Arachis hypogaea(23)花生 Glycine max(203)大豆 Glycine soja(13)野生大豆 Lotus japonicus(3)Medicago truncatula(375)蒺藜苜蓿 Phaseolus vulgaris(8)Vigna unguiculata(2)Lamiales 唇形科 Rehmannia glutinosa(6)地黄 Malvaceae 锦葵科 Gossypium arboretum(1)Gossypium herbacium(1)中棉 Gossypium hirsutum(34)陆地棉 Gossypium raimondii(4)Theobroma cacao(82)可可 Ranunculaceae 毛茛科 Aquilegia caerulea(45)Rosaceae 蔷薇科 Malus domestica(1)Rutaceae 芸香科 Citrus clementine(5)克莱门氏柑桔 Citrus reticulata(4)柑桔 Citrus sinensis(60)橙 Citrus trifoliata(6)枳 Salicaceae 杨柳科 Populus euphratica(5)胡杨 Populus trichocarpa(234)毛果杨，黑色三角叶杨 Solanaceae 茄科 Solanum lycopersicum(36)番茄 Vitaceae 葡萄科 Vitis vinifera(163)葡萄 monocotyledons 单子叶植物纲 Aegilops tauschii(2)粗山羊草 Brachypodium distachyon(139)二穗短柄草 Festuca arundinacea(15)高羊茅 Hordeum vulgare(22)大麦 Oryza sativa(491)水稻 Sorghum bicolor(148)高粱 Saccharum officinarum(16)甘蔗 Saccharum spp.(18)Triticum aestivum(44)圆锥小麦 Triticum turgidum(1)四倍体小麦 Zea mays(170)玉米 Viruses 病毒 Bovine herpesvirus 1(10)I 型牛疱疹病毒 BK polyomavirus(1)Bandicoot papillomatosis carcinomatosis virus type 1(1)Bandicoot papillomatosis carcinomatosis virus type 2(1)Epstein Barr virus(25)Herpes B virus(3)Human cytomegalovirus(11)Human immunodeficiency virus 1(3)Herpes Simplex Virus 1(16)Herpes Simplex Virus 2(18)Herpesvirus of turkeys(17)Infectious laryngotracheitis virus(7)JC polyomavirus(1)Kaposi sarcoma-associated herpesvirus(13)Mouse cytomegalovirus(18)Merkel cell polyomavirus(1)Mareks disease virus(14)Mareks disease virus type 2(18)Mouse gammaherpesvirus 68(15)Rhesus lymphocryptovirus(36)Rhesus monkey rhadinovirus(7)Simian virus 40(1)